sORF.org default query interface
Below, the default sORF.org default query interface is presented. A user guide concerning this interface can be found here. For more advanced querying and custom export functions, feel free to consult our BioMart sORFs database implementation. Information concerning the different datasets included in this sORFs.org repository can be found here| filter name | input | information |
| transcript sequence | input transcript sequence | |
| amino acid sequence | input amino acid sequence | |
| Ensembl gene ID | ||
| Conserved sORFs | All sorfs with PhastCon>0.7 and PhyloP>4 | |
| Bazinni sORFs | sORFs as defined by Bazinni et al. (in frame coverage > 0.1 and ORFscore > 6 |
| sORF ID | ENSEMBL ID | Species | Dataset | CHR | Begin pos | End pos | length | Annotation | Biotype | Overlap | PhastCon | PhyloP | aa_seq | tr_seq | in_frame_coverage | orfscore | gene_id |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|